STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mns1Meiosis-specific nuclear structural 1. (496 aa)    
Predicted Functional Partners:
efhc2
EF-hand domain (C-terminal) containing 2.
  
 
 
 0.856
tekt2
Tektin 2 (testicular).
    
 
 0.847
pacrg
PARK2 co-regulated.
  
 
 
 0.839
efhb
Uncharacterized protein.
    
 
 0.839
tekt3
Tektin 3.
   
 
 0.825
ENSORLP00000041141
Uncharacterized protein.
    
 
 0.824
H2MRV4_ORYLA
Coiled-coil domain containing 173.
   
  0.817
cfap52
Cilia and flagella associated protein 52.
   
  0.816
LOC101157797
Cilia and flagella associated protein 45.
   
 0.816
c9h9orf116
Uncharacterized protein.
    
 
 0.816
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.