STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfap161Cilia and flagella associated protein 161. (278 aa)    
Predicted Functional Partners:
spag8
Sperm associated antigen 8.
   
 
 0.978
efhc1
EF-hand domain (C-terminal) containing 1.
   
 
 0.963
cfap52
Cilia and flagella associated protein 52.
   
 0.960
efhc2
EF-hand domain (C-terminal) containing 2.
   
 
 0.956
nme7
Nucleoside diphosphate kinase 7; Belongs to the NDK family.
    
 0.953
mns1
Meiosis-specific nuclear structural 1.
   
 0.946
c9h9orf116
Uncharacterized protein.
   
 
 0.938
tekt2
Tektin 2 (testicular).
   
 
 0.934
rsph14
Uncharacterized protein.
   
 
 0.933
efhb
Uncharacterized protein.
   
 
 0.931
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.