STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101157800Proteolipid protein 1b. (245 aa)    
Predicted Functional Partners:
mbp
Myelin basic protein b.
   
 
 0.967
LOC101165395
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
   
  
 0.712
plp2
Proteolipid protein 2.
   
  
 0.711
LOC101160301
Amino acid transporter.
   
 
 0.710
LOC101167791
Amino acid transporter.
   
 
 0.710
slc1a2
Amino acid transporter.
   
 
 0.710
s100b
S100 calcium binding protein, beta (neural); Belongs to the S-100 family.
   
  
 0.684
CNP
2',3'-cyclic nucleotide 3' phosphodiesterase.
   
  
 0.679
mpz
Myelin protein zero.
   
  
 0.673
LOC101159204
Myelin basic protein a.
   
  
 0.638
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.