STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtfr1Mitochondrial fission regulator 1. (313 aa)    
Predicted Functional Partners:
rasa1
RAS p21 protein activator (GTPase activating protein) 1a.
   
    0.822
CPQ
Carboxypeptidase Q.
     
 0.705
LOC100049402
Somatolactin; Selectively regulates proliferation and morphogenesis of neural-crest derived pigment cells; Belongs to the somatotropin/prolactin family.
   
    0.652
LOC101171460
Uncharacterized protein.
   
    0.652
epha8
Uncharacterized protein.
    
 0.619
ghrh
Growth hormone releasing hormone.
   
    0.594
gemin5
Gem (nuclear organelle) associated protein 5.
   
  
 0.577
anln
Anillin, actin binding protein.
   
 
 0.537
LOC101174346
Si:dkey-30c15.10.
   
 
 0.537
LOC101165461
Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
 0.507
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.