STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cenpuUncharacterized protein. (425 aa)    
Predicted Functional Partners:
H2MZX5_ORYLA
Centromere protein P.
   
 0.898
cenpi
Centromere protein I.
   
 0.897
cenpk
Centromere protein K.
   
 0.876
cenpn
Centromere protein N.
   
 0.871
cenpq
Uncharacterized protein.
   
 0.834
cenpm
Proliferation associated nuclear element.
   
 0.822
apaf1
Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.
    
 0.790
ENSORLP00000032097
Uncharacterized protein.
   
 0.784
LOC101166883
X-linked inhibitor of apoptosis.
   
 0.784
cenpw
Uncharacterized protein.
   
 0.740
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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