STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bmp15Bone morphogenetic protein 15. (444 aa)    
Predicted Functional Partners:
bmpr2
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.973
bmpr1b
Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.965
LOC101163987
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.961
figla
BHLH domain-containing protein.
   
  
 0.890
amh
Anti-muellerian hormone.
  
  
0.807
ptgs2
EGF-like domain-containing protein.
      
 0.801
fshb
Cys_knot domain-containing protein.
   
 
 0.787
dmy
Doublesex- and mab-3-related transcription factor 1; Transcription factor that acts both as a transcription.
      
 0.772
LOC101167158
Growth hormone secretagogue receptor b; Belongs to the G-protein coupled receptor 1 family.
     
 0.753
LOC101174651
Aromatase; Catalyzes the formation of aromatic C18 estrogens from C19 androgens.
      
 0.725
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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