Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101170379Cytochrome c oxidase copper chaperone COX17. (65 aa)    
Predicted Functional Partners:
LOC101159951
Cytochrome c oxidase assembly homolog 11 (yeast).
   
 
 0.968
atox1
Antioxidant 1 copper chaperone.
   
 
 0.943
H2N085_ORYLA
SCO cytochrome c oxidase assembly protein 2.
   
 0.941
LOC101175404
SCO cytochrome c oxidase assembly protein 1.
   
 0.925
LOC101169354
CHCH domain-containing protein.
   
 0.923
scyl2
SCY1 like pseudokinase 2.
    
   0.899
LOC101168000
Cytochrome C oxidase assembly factor 5.
   
 
 0.897
atp6v1d
ATPase H+ transporting V1 subunit D.
   
  
 0.895
COX2
Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1.
     
 0.863
cmc1
COX assembly mitochondrial protein.
   
 
 0.854
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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