STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ythdf3YTH N(6)-methyladenosine RNA binding protein 3. (602 aa)    
Predicted Functional Partners:
mettl14
Methyltransferase like 14; Belongs to the MT-A70-like family.
  
 
 
 0.925
alkbh5
AlkB homolog 5, RNA demethylase.
      
 0.901
fto
FTO alpha-ketoglutarate dependent dioxygenase.
      
 0.836
mettl3
Methyltransferase like 3; Belongs to the MT-A70-like family.
  
 
 
 0.822
wtap
WT1 associated protein.
  
  
 0.821
YTHDF1
YTH N6-methyladenosine RNA binding protein 1.
   
 
 0.782
LOC101169361
YTH N6-methyladenosine RNA binding protein 1.
   
 
 0.782
LOC101162819
Zinc finger CCCH-type containing 13.
    
 
 0.745
zfc3h1
Uncharacterized protein.
    
 
 0.743
prrc2a
Proline-rich coiled-coil 2A.
   
 
 0.742
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.