Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MOSMOUncharacterized protein. (167 aa)    
Predicted Functional Partners:
smo
Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.
     
 0.919
LOC101154810
Uncharacterized protein.
  
  
 
0.901
mgrn1
Mahogunin, ring finger 1b.
    
 
 0.662
fam20b
FAM20B glycosaminoglycan xylosylkinase.
      
 0.572
rnf157
Ring finger protein 157.
    
 
 0.504
setd5
SET domain containing 5.
      
 0.498
H2LEI1_ORYLA
Uncharacterized protein.
    
 
 0.485
megf8
Multiple EGF-like-domains 8.
    
 
 0.485
atrn
Attractin.
    
 
 0.485
atrnl1
Attractin-like 1b.
    
 
 0.485
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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