Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RAD23B | derl1 | ENSORLP00000007067 | ENSORLP00000041992 | RAD23 homolog B, nucleotide excision repair protein. | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | 0.709 |
| RAD23B | katnal2 | ENSORLP00000007067 | ENSORLP00000014904 | RAD23 homolog B, nucleotide excision repair protein. | Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays. | 0.844 |
| RAD23B | ngly1 | ENSORLP00000007067 | ENSORLP00000010847 | RAD23 homolog B, nucleotide excision repair protein. | N-glycanase 1. | 0.969 |
| RAD23B | psmc1 | ENSORLP00000007067 | ENSORLP00000019820 | RAD23 homolog B, nucleotide excision repair protein. | Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family. | 0.936 |
| RAD23B | rad23a | ENSORLP00000007067 | ENSORLP00000031881 | RAD23 homolog B, nucleotide excision repair protein. | RAD23 homolog A, nucleotide excision repair protein a. | 0.917 |
| RAD23B | rps27a | ENSORLP00000007067 | ENSORLP00000038189 | RAD23 homolog B, nucleotide excision repair protein. | Ribosomal protein S27a. | 0.890 |
| RAD23B | spata5l1 | ENSORLP00000007067 | ENSORLP00000003033 | RAD23 homolog B, nucleotide excision repair protein. | Spermatogenesis associated 5-like 1. | 0.834 |
| RAD23B | ubc | ENSORLP00000007067 | ENSORLP00000015065 | RAD23 homolog B, nucleotide excision repair protein. | Ubiquitin B. | 0.942 |
| RAD23B | ubxn1 | ENSORLP00000007067 | ENSORLP00000003465 | RAD23 homolog B, nucleotide excision repair protein. | UBX domain protein 1. | 0.729 |
| RAD23B | vcp | ENSORLP00000007067 | ENSORLP00000010644 | RAD23 homolog B, nucleotide excision repair protein. | Valosin containing protein; Belongs to the AAA ATPase family. | 0.834 |
| derl1 | RAD23B | ENSORLP00000041992 | ENSORLP00000007067 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | RAD23 homolog B, nucleotide excision repair protein. | 0.709 |
| derl1 | katnal2 | ENSORLP00000041992 | ENSORLP00000014904 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays. | 0.978 |
| derl1 | ngly1 | ENSORLP00000041992 | ENSORLP00000010847 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | N-glycanase 1. | 0.838 |
| derl1 | psmc1 | ENSORLP00000041992 | ENSORLP00000019820 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family. | 0.864 |
| derl1 | rad23a | ENSORLP00000041992 | ENSORLP00000031881 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | RAD23 homolog A, nucleotide excision repair protein a. | 0.709 |
| derl1 | rps27a | ENSORLP00000041992 | ENSORLP00000038189 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Ribosomal protein S27a. | 0.665 |
| derl1 | spata5l1 | ENSORLP00000041992 | ENSORLP00000003033 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Spermatogenesis associated 5-like 1. | 0.968 |
| derl1 | ubc | ENSORLP00000041992 | ENSORLP00000015065 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Ubiquitin B. | 0.676 |
| derl1 | ubxn1 | ENSORLP00000041992 | ENSORLP00000003465 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | UBX domain protein 1. | 0.959 |
| derl1 | vcp | ENSORLP00000041992 | ENSORLP00000010644 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Valosin containing protein; Belongs to the AAA ATPase family. | 0.977 |
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