STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
st3gal5ST3 beta-galactoside alpha-2,3-sialyltransferase 5; Belongs to the glycosyltransferase 29 family. (364 aa)    
Predicted Functional Partners:
st8sia1
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
     
0.968
LOC101171003
Beta-1,4 N-acetylgalactosaminyltransferase.
     
 0.940
b4galnt1
Beta-1,4 N-acetylgalactosaminyltransferase.
     
 0.940
hexb
Beta-hexosaminidase.
     
 0.923
LOC101172329
Beta-hexosaminidase.
     
 0.923
neu1
Sialidase 1.
     
 0.888
LOC101162446
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5.
     
 0.887
LOC101160972
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6.
     
 0.887
neu4
Sialidase 4.
     
 0.872
nans
N-acetylneuraminic acid synthase a.
      
 0.847
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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