STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vwfVon Willebrand factor. (2849 aa)    
Predicted Functional Partners:
LOC101172732
Glycoprotein IX (platelet).
   
 0.954
gp1bb
Glycoprotein Ib platelet subunit beta.
   
 0.954
LOC101168465
Integrin beta; Belongs to the integrin beta chain family.
   
 0.930
itgb3
Integrin beta; Belongs to the integrin beta chain family.
   
 0.930
H2LM43_ORYLA
LRRCT domain-containing protein.
   
 0.929
itgb1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.812
itgb6
Integrin beta; Belongs to the integrin beta chain family.
   
 0.801
itga8
Integrin, alpha 8; Belongs to the integrin alpha chain family.
   
 0.779
LOC101154978
Integrin beta; Belongs to the integrin beta chain family.
   
 0.758
fau
40S ribosomal protein S30.
   
  0.758
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.