Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101159101Si:dkey-32e6.6. (638 aa)    
Predicted Functional Partners:
LOC101162873
Leucine rich repeat containing 18b.
  
     0.525
H2LYU2_ORYLA
Leucine rich repeat containing 18a.
  
     0.524
lrrc10
Leucine rich repeat containing 10.
  
     0.523
lrrc28
Leucine rich repeat containing 28.
  
 
  0.519
ENSORLP00000044935
Uncharacterized protein.
  
     0.517
LRRC10B
Leucine rich repeat containing 10B.
  
     0.515
lrrc58
Leucine rich repeat containing 58b.
  
     0.511
lrrc20
Leucine rich repeat containing 20.
  
     0.508
LOC101162605
Leucine rich repeat containing 8 VRAC subunit Ab.
  
     0.503
lrrc8a
Leucine rich repeat containing 8 VRAC subunit Aa.
  
     0.501
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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