STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2LXQ7_ORYLAG_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (364 aa)    
Predicted Functional Partners:
ENSORLP00000032081
SCY domain-containing protein.
   
 0.805
ENSORLP00000036734
SCY domain-containing protein.
   
 0.805
LOC101163143
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
   
 0.664
znrf1
Zinc and ring finger 1.
      
 0.638
cxcl12
Chemokine (C-X-C motif) ligand 12b; Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.601
a-sdf1a
Chemokine (C-X-C motif) ligand 12a; Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.601
CLEC3A
C-type lectin domain family 3 member A.
     
 0.579
LOC101168199
WD_REPEATS_REGION domain-containing protein.
    
 0.524
LOC101175500
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
    
 0.524
gnb4
Guanine nucleotide binding protein (G protein), beta polypeptide 4b.
    
 0.524
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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