STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl34Mitochondrial ribosomal protein L34. (117 aa)    
Predicted Functional Partners:
mrpl13
Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.994
mrpl43
Mitochondrial ribosomal protein L43.
   
 
 0.993
mrps15
Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.992
mrpl46
Mitochondrial ribosomal protein L46.
   
 
 0.990
mrpl16
Mitochondrial ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
   
 0.990
mrpl33
Mitochondrial ribosomal protein L33.
   
 
 0.990
mrpl19
Mitochondrial ribosomal protein L19.
   
 
 0.989
mrpl41
Uncharacterized protein.
   
 
 0.989
mrpl30
Mitochondrial ribosomal protein L30.
   
 
 0.988
mrpl17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.987
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.