STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101162218Aminopeptidase. (945 aa)    
Predicted Functional Partners:
uggt1
UDP-glucose glycoprotein glucosyltransferase 1.
   
  
 0.624
agt
Angiotensinogen; Belongs to the serpin family.
  
 0.556
lap3
Leucine aminopeptidase 3.
   
 
 0.505
arsa
Arylsulfatase A.
   
  
 0.488
rpa2
Replication protein A2.
   
 
 0.471
tapbpl
TAP binding protein like.
      
 0.464
tbc1d1
TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1.
     
 0.427
tbc1d4
TBC1 domain family, member 4.
     
 0.427
prep
Prolyl endopeptidase.
  
  
 0.427
LOC101169766
Serpin peptidase inhibitor, clade G (C1 inhibitor), member 1; Belongs to the serpin family.
  
 
 0.418
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.