STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alg2ALG2 alpha-1,3/1,6-mannosyltransferase. (405 aa)    
Predicted Functional Partners:
alg1
ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase.
    
 0.993
LOC101175546
ALG11 alpha-1,2-mannosyltransferase.
   
0.960
LOC101159230
Uncharacterized protein.
   
0.960
mus81
MUS81 structure-specific endonuclease subunit.
   
 0.947
fancm
Uncharacterized protein.
   
 0.833
gbe1
Glucan (1,4-alpha-), branching enzyme 1b.
   
 0.808
gmppb
GDP-mannose pyrophosphorylase B.
  
 0.749
alg5
ALG5 dolichyl-phosphate beta-glucosyltransferase.
  
 
 0.724
pgm3
Phosphoacetylglucosamine mutase; Catalyzes the conversion of GlcNAc-6-P into GlcNAc-1-P during the synthesis of uridine diphosphate/UDP-GlcNAc, a sugar nucleotide critical to multiple glycosylation pathways including protein N- and O- glycosylation; Belongs to the phosphohexose mutase family.
  
 
 0.717
blm
Uncharacterized protein.
    
 
 0.714
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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