Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101163031Anoctamin. (1010 aa)    
Predicted Functional Partners:
plvap
Plasmalemma vesicle associated protein b.
    
 0.893
LOC101171737
Nuclear receptor subfamily 2, group F, member 6b.
      
 0.890
LOC101163275
Plasmalemma vesicle associated protein a.
    
 0.694
nr1h4
Nuclear receptor subfamily 1, group H, member 4.
      
 0.604
nr2f1
Nuclear receptor subfamily 2, group F, member 1a.
      
 0.601
bola1
BolA family member 1; Belongs to the BolA/IbaG family.
      
 0.543
kcnk2
Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
      
 0.541
LOC101167327
FAM20C golgi associated secretory pathway kinase.
     
  0.532
LOC101163577
FAM20C golgi associated secretory pathway kinase a.
     
  0.532
LOC101167397
Nuclear receptor subfamily 2, group F, member 6a.
      
 0.509
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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