STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101173674Solute carrier organic anion transporter family member. (677 aa)    
Predicted Functional Partners:
SLCO1C1
Solute carrier organic anion transporter family member.
  
  
 
0.903
LOC101174684
Solute carrier organic anion transporter family member.
  
  
 
0.903
LOC101163217
5'-nucleotidase, cytosolic IB b.
      
 0.647
slc16a10
Solute carrier family 16 member 10.
   
 
 0.574
LOC101174678
Uncharacterized protein.
   
 
 0.574
abcf1
ATP-binding cassette, sub-family F (GCN20), member 1.
      
 0.531
recql
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
      
 0.464
SLC10A1
Solute carrier family 10 member 1.
   
  
 0.435
acot11
Acyl-coenzyme A thioesterase 11.
   
  
 0.404
LOC101159853
Uncharacterized protein.
   
  
 0.404
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.