Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101165947Guanine nucleotide binding protein (G protein), gamma 13a. (67 aa)    
Predicted Functional Partners:
LOC101168199
WD_REPEATS_REGION domain-containing protein.
   
 0.953
gnb5
Guanine nucleotide binding protein (G protein), beta 5a.
   
 0.953
LOC101175500
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
   
 0.953
gnb3
Guanine nucleotide binding protein (G protein), beta polypeptide 3a.
   
 0.953
LOC101156727
Guanine nucleotide binding protein (G protein), beta 5b.
   
 0.953
gnb4
Guanine nucleotide binding protein (G protein), beta polypeptide 4b.
   
 0.953
ol-gb1
WD_REPEATS_REGION domain-containing protein.
   
 0.953
LOC101168134
Guanine nucleotide binding protein (G protein), alpha 14.
    
 0.950
LOC101171292
Guanine nucleotide binding protein (G protein), gamma 7.
     
 0.946
LOC101161831
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
     
 0.946
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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