Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LOC101167397 | fabp7 | ENSORLP00000010989 | ENSORLP00000037487 | Nuclear receptor subfamily 2, group F, member 6a. | Brain-specific fatty acid binding protein; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. | 0.402 |
| LOC101167397 | med1 | ENSORLP00000010989 | ENSORLP00000043584 | Nuclear receptor subfamily 2, group F, member 6a. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.507 |
| LOC101167397 | ncor1 | ENSORLP00000010989 | ENSORLP00000015017 | Nuclear receptor subfamily 2, group F, member 6a. | Nuclear receptor corepressor 1. | 0.550 |
| LOC101167397 | ncor2 | ENSORLP00000010989 | ENSORLP00000017559 | Nuclear receptor subfamily 2, group F, member 6a. | Nuclear receptor corepressor 2. | 0.550 |
| LOC101167397 | polr2b | ENSORLP00000010989 | ENSORLP00000025492 | Nuclear receptor subfamily 2, group F, member 6a. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.409 |
| fabp7 | LOC101167397 | ENSORLP00000037487 | ENSORLP00000010989 | Brain-specific fatty acid binding protein; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. | Nuclear receptor subfamily 2, group F, member 6a. | 0.402 |
| med1 | LOC101167397 | ENSORLP00000043584 | ENSORLP00000010989 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear receptor subfamily 2, group F, member 6a. | 0.507 |
| med1 | ncor1 | ENSORLP00000043584 | ENSORLP00000015017 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear receptor corepressor 1. | 0.654 |
| med1 | ncor2 | ENSORLP00000043584 | ENSORLP00000017559 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear receptor corepressor 2. | 0.654 |
| med1 | polr2b | ENSORLP00000043584 | ENSORLP00000025492 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.920 |
| ncor1 | LOC101167397 | ENSORLP00000015017 | ENSORLP00000010989 | Nuclear receptor corepressor 1. | Nuclear receptor subfamily 2, group F, member 6a. | 0.550 |
| ncor1 | med1 | ENSORLP00000015017 | ENSORLP00000043584 | Nuclear receptor corepressor 1. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.654 |
| ncor2 | LOC101167397 | ENSORLP00000017559 | ENSORLP00000010989 | Nuclear receptor corepressor 2. | Nuclear receptor subfamily 2, group F, member 6a. | 0.550 |
| ncor2 | med1 | ENSORLP00000017559 | ENSORLP00000043584 | Nuclear receptor corepressor 2. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.654 |
| polr2b | LOC101167397 | ENSORLP00000025492 | ENSORLP00000010989 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Nuclear receptor subfamily 2, group F, member 6a. | 0.409 |
| polr2b | med1 | ENSORLP00000025492 | ENSORLP00000043584 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.920 |