STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc30a3Solute carrier family 30 member 2. (354 aa)    
Predicted Functional Partners:
LOC101170716
Carrier domain-containing protein.
  
 
 0.649
LOC101169644
Si:dkey-61p9.11.
  
 
 0.649
olpks
Carrier domain-containing protein.
  
 
 0.649
H2MEE3_ORYLA
Carrier domain-containing protein.
  
 
 0.649
slc30a6
Solute carrier family 30 member 6.
    
 
 0.593
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
  
 0.587
slc39a7
Solute carrier family 39 member 7.
   
 
 0.560
slc39a13
Solute carrier family 39 member 13.
    
 
 0.559
slc39a14
Solute carrier family 39 member 14.
   
 
 0.533
slc39a8
Solute carrier family 39 member 8.
   
 
 0.514
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.