STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dusp23Dual specificity phosphatase 23a. (151 aa)    
Predicted Functional Partners:
exosc8
Exosome component 8.
   
   0.853
cdc6
Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.
   
 
 0.756
nrde2
NRDE-2, necessary for RNA interference, domain containing.
    
 
 0.726
LOC101174862
Fizzy/cell division cycle 20 related 1b.
   
 0.682
FZR1
Fizzy/cell division cycle 20 related 1a.
   
 0.682
cdc20
WD_REPEATS_REGION domain-containing protein.
   
 0.682
cdc20b
WD_REPEATS_REGION domain-containing protein.
   
 0.682
intu
Inturned planar cell polarity protein.
   
 0.682
LOC101168748
Uncharacterized protein.
    
 0.669
LOC101159672
Growth arrest-specific 7a.
    
 0.669
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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