Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101175040Solute carrier family 5 member 8; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (550 aa)    
Predicted Functional Partners:
LOC101158870
Sulfate anion transporter 1; Mediates sulfate transport with high affinity. Mediates oxalate transport. Mediates bicarbonate transport. Does not accept succinate as cosubstrate; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
      
 0.662
pdzd11
PDZ domain containing 11.
    
 0.591
LOC101163192
Solute carrier family 22 member 4.
      
 0.539
cass4
Cas scaffold protein family member 4.
      
 0.501
LOC101159211
Uncharacterized protein.
      
 0.498
slc22a18
Solute carrier family 22 member 18.
   
  
 0.476
SLC49A3
Solute carrier family 49 member 3.
      
 0.464
LOC101161007
Solute carrier family 22 member 13a.
   
  
 0.463
LOC101161268
Solute carrier family 22 member 13a.
   
  
 0.463
slc12a2
Solute carrier family 12 member 2.
   
  
 0.463
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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