STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101160809Acylaminoacyl-peptide hydrolase. (730 aa)    
Predicted Functional Partners:
LOC101168224
Uncharacterized protein.
   
 
 0.860
prep
Prolyl endopeptidase.
   
 
0.732
NCSTN
Nicastrin.
   
  
 0.581
ist1
IST1 factor associated with ESCRT-III.
    
 
 0.578
utp11
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
      
 0.491
ENSORLP00000032656
Uncharacterized protein.
   
 
  0.485
lepa
Leptin-A; May function as part of a signaling pathway that acts to regulate the size of the body fat depot.
     
 0.474
psenen
Presenilin enhancer, gamma-secretase subunit.
      
 0.471
sec11a
Signal peptidase complex catalytic subunit SEC11.
   
 
 0.448
Grp
Uncharacterized protein.
   
 
 0.448
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.