STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cog4Component of oligomeric golgi complex 4. (773 aa)    
Predicted Functional Partners:
cog2
Component of oligomeric golgi complex 2.
   
 0.990
cog3
Component of oligomeric golgi complex 3.
    
 0.990
cog8
Component of oligomeric golgi complex 8.
   
 0.990
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.989
cog7
Component of oligomeric golgi complex 7.
    
 0.989
COG5
Component of oligomeric golgi complex 5.
    
 0.989
cog1
Component of oligomeric golgi complex 1.
    
 0.985
cmtr2
Cap methyltransferase 2.
      
 0.875
stx16
Syntaxin 16; Belongs to the syntaxin family.
     
 0.866
psme3ip1
Family with sequence similarity 192 member A.
      
 0.862
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.