STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmx1Thioredoxin-related transmembrane protein 1. (412 aa)    
Predicted Functional Partners:
prdx5
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.638
txnl1
Thioredoxin-like 1.
    
 0.628
LOC101163534
Si:ch1073-358c10.1.
   
 0.613
LOC101174315
Methionine sulfoxide reductase A.
   
 0.613
LOC101159642
Calmegin.
   
 0.587
canx
Calnexin.
   
 0.587
LOC101167922
Endoplasmic reticulum oxidoreductase alpha.
   
 0.569
ero1b
Endoplasmic reticulum oxidoreductase beta.
   
 0.569
dld
Dihydrolipoyl dehydrogenase.
  
 0.567
txndc15
Thioredoxin domain containing 15.
      
 0.558
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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