gem protein (Oryzias latipes) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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co-expression

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[Homology]

Score

gem

GTP binding protein overexpressed in skeletal muscle. (306 aa)

Predicted Functional Partners:

ca10

0.693

spata18

0.563

LOC101157824

0.526

frmpd2

0.522

ENSORLP00000039435

0.522

ENSORLP00000032656

0.518

H2L4B7_ORYLA

0.517

Mtor

0.517

H2M6E4_ORYLA

0.516

LOC101165932

0.516

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSORLP00000032656	H2M6E4_ORYLA	ENSORLP00000032656	ENSORLP00000014038	Uncharacterized protein.	Uncharacterized protein.	0.685
ENSORLP00000032656	LOC101165932	ENSORLP00000032656	ENSORLP00000020940	Uncharacterized protein.	Intersectin 2a.	0.685
ENSORLP00000032656	gem	ENSORLP00000032656	ENSORLP00000011160	Uncharacterized protein.	GTP binding protein overexpressed in skeletal muscle.	0.518
ENSORLP00000039435	gem	ENSORLP00000039435	ENSORLP00000011160	PDZ domain-containing protein.	GTP binding protein overexpressed in skeletal muscle.	0.522
H2L4B7_ORYLA	Mtor	ENSORLP00000000606	ENSORLP00000000608	Mechanistic target of rapamycin kinase; Belongs to the PI3/PI4-kinase family.	Serine/threonine-protein kinase TOR.	0.934
H2L4B7_ORYLA	gem	ENSORLP00000000606	ENSORLP00000011160	Mechanistic target of rapamycin kinase; Belongs to the PI3/PI4-kinase family.	GTP binding protein overexpressed in skeletal muscle.	0.517
H2M6E4_ORYLA	ENSORLP00000032656	ENSORLP00000014038	ENSORLP00000032656	Uncharacterized protein.	Uncharacterized protein.	0.685
H2M6E4_ORYLA	LOC101165932	ENSORLP00000014038	ENSORLP00000020940	Uncharacterized protein.	Intersectin 2a.	0.838
H2M6E4_ORYLA	gem	ENSORLP00000014038	ENSORLP00000011160	Uncharacterized protein.	GTP binding protein overexpressed in skeletal muscle.	0.516
LOC101157824	gem	ENSORLP00000021687	ENSORLP00000011160	Tetraspanin.	GTP binding protein overexpressed in skeletal muscle.	0.526
LOC101157824	spata18	ENSORLP00000021687	ENSORLP00000000195	Tetraspanin.	Spermatogenesis associated 18.	0.717
LOC101165932	ENSORLP00000032656	ENSORLP00000020940	ENSORLP00000032656	Intersectin 2a.	Uncharacterized protein.	0.685
LOC101165932	H2M6E4_ORYLA	ENSORLP00000020940	ENSORLP00000014038	Intersectin 2a.	Uncharacterized protein.	0.838
LOC101165932	gem	ENSORLP00000020940	ENSORLP00000011160	Intersectin 2a.	GTP binding protein overexpressed in skeletal muscle.	0.516
Mtor	H2L4B7_ORYLA	ENSORLP00000000608	ENSORLP00000000606	Serine/threonine-protein kinase TOR.	Mechanistic target of rapamycin kinase; Belongs to the PI3/PI4-kinase family.	0.934
Mtor	gem	ENSORLP00000000608	ENSORLP00000011160	Serine/threonine-protein kinase TOR.	GTP binding protein overexpressed in skeletal muscle.	0.517
ca10	gem	ENSORLP00000037826	ENSORLP00000011160	Carbonic anhydrase Xa; Belongs to the alpha-carbonic anhydrase family.	GTP binding protein overexpressed in skeletal muscle.	0.693
frmpd2	gem	ENSORLP00000002879	ENSORLP00000011160	FERM and PDZ domain containing 2.	GTP binding protein overexpressed in skeletal muscle.	0.522
gem	ENSORLP00000032656	ENSORLP00000011160	ENSORLP00000032656	GTP binding protein overexpressed in skeletal muscle.	Uncharacterized protein.	0.518
gem	ENSORLP00000039435	ENSORLP00000011160	ENSORLP00000039435	GTP binding protein overexpressed in skeletal muscle.	PDZ domain-containing protein.	0.522