STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101169478Rho GTPase activating protein 35b. (1529 aa)    
Predicted Functional Partners:
LOC101155194
Uncharacterized protein.
    
 0.965
LOC101173444
Uncharacterized protein.
    
 0.965
LOC101158607
Uncharacterized protein.
    
 0.965
LOC101167618
Uncharacterized protein.
    
 0.965
SRC
Tyrosine-protein kinase.
    
  0.928
LOC101164480
Tyrosine-protein kinase.
    
  0.928
arhgap35
Uncharacterized protein.
  
  
 
0.901
arhgap5
Rho GTPase activating protein 5.
  
  
 
0.901
rasa1
RAS p21 protein activator (GTPase activating protein) 1a.
    
 0.889
RHOB
Ras homolog family member B.
    
 0.665
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.