STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
serinc5Serine incorporator 5. (422 aa)    
Predicted Functional Partners:
LOC101159430
Si:ch73-267c23.10.
  
 
0.910
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 
 0.632
LOC100125525
Uncharacterized protein.
      
 0.570
mfsd10
Major facilitator superfamily domain containing 10.
      
 0.525
slc30a5
Solute carrier family 30 member 5.
      
 0.512
NEMF
Nuclear export mediator factor.
      
 0.498
melk
Non-specific serine/threonine protein kinase.
      
 0.492
aldh1a2
Retinaldehyde dehydrogenase type2; Belongs to the aldehyde dehydrogenase family.
      
 0.480
ice2
Interactor of little elongator complex ELL subunit 2.
      
 0.464
LOC101161087
Carbonic anhydrase; Belongs to the alpha-carbonic anhydrase family.
      
 0.429
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.