STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101171737Nuclear receptor subfamily 2, group F, member 6b. (406 aa)    
Predicted Functional Partners:
fabp7
Brain-specific fatty acid binding protein; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
    
 0.713
plvap
Plasmalemma vesicle associated protein b.
    
 0.700
LOC101163031
Anoctamin.
      
 0.690
bola1
BolA family member 1; Belongs to the BolA/IbaG family.
      
 0.690
ano8
Anoctamin.
      
 0.690
LOC101156489
Nuclear receptor coactivator 3.
    
 0.598
NCOA3
Nuclear receptor coactivator.
    
 0.588
med26
TFIIS N-terminal domain-containing protein.
    
 0.558
ncor1
Nuclear receptor corepressor 1.
    
 0.550
ncor2
Nuclear receptor corepressor 2.
    
 0.550
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.