STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101167354Solute carrier family 38 member 8b. (424 aa)    
Predicted Functional Partners:
LOC101162152
Ras-related GTP binding A.
   
 0.510
gpr143
G protein-coupled receptor 143.
      
 0.503
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.502
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.486
ENSORLP00000026521
Uncharacterized protein.
   
 
 0.486
ENSORLP00000034554
C2 domain-containing protein.
   
 
 0.486
ascc3
Activating signal cointegrator 1 complex subunit 3.
      
 0.475
slc25a35
Solute carrier family 25 member 35; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.468
lamtor1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
    
 0.447
KIF18A
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.436
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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