rad54b protein (Oryzias latipes) - STRING interaction network

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[Homology]

Score

rad54b

RAD54 homolog B. (935 aa)

Predicted Functional Partners:

rad54l

0.906

fancm

0.875

rad51

0.875

mus81

0.823

rad51d

0.799

pcna

0.796

top3a

0.792

blm

0.788

Rad51c

0.787

pfdn5

0.780

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Rad51c	blm	ENSORLP00000024828	ENSORLP00000027048	RAD51 paralog C.	Uncharacterized protein.	0.941
Rad51c	fancm	ENSORLP00000024828	ENSORLP00000018174	RAD51 paralog C.	Uncharacterized protein.	0.928
Rad51c	mus81	ENSORLP00000024828	ENSORLP00000036282	RAD51 paralog C.	MUS81 structure-specific endonuclease subunit.	0.899
Rad51c	pcna	ENSORLP00000024828	ENSORLP00000037447	RAD51 paralog C.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.854
Rad51c	rad51	ENSORLP00000024828	ENSORLP00000022299	RAD51 paralog C.	DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...]	0.979
Rad51c	rad51d	ENSORLP00000024828	ENSORLP00000019089	RAD51 paralog C.	RAD51 paralog D.	0.999
Rad51c	rad54b	ENSORLP00000024828	ENSORLP00000011190	RAD51 paralog C.	RAD54 homolog B.	0.787
Rad51c	rad54l	ENSORLP00000024828	ENSORLP00000029824	RAD51 paralog C.	RAD54 like.	0.787
Rad51c	top3a	ENSORLP00000024828	ENSORLP00000017374	RAD51 paralog C.	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	0.906
blm	Rad51c	ENSORLP00000027048	ENSORLP00000024828	Uncharacterized protein.	RAD51 paralog C.	0.941
blm	fancm	ENSORLP00000027048	ENSORLP00000018174	Uncharacterized protein.	Uncharacterized protein.	0.998
blm	mus81	ENSORLP00000027048	ENSORLP00000036282	Uncharacterized protein.	MUS81 structure-specific endonuclease subunit.	0.966
blm	pcna	ENSORLP00000027048	ENSORLP00000037447	Uncharacterized protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.913
blm	rad51	ENSORLP00000027048	ENSORLP00000022299	Uncharacterized protein.	DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...]	0.997
blm	rad51d	ENSORLP00000027048	ENSORLP00000019089	Uncharacterized protein.	RAD51 paralog D.	0.924
blm	rad54b	ENSORLP00000027048	ENSORLP00000011190	Uncharacterized protein.	RAD54 homolog B.	0.788
blm	rad54l	ENSORLP00000027048	ENSORLP00000029824	Uncharacterized protein.	RAD54 like.	0.788
blm	top3a	ENSORLP00000027048	ENSORLP00000017374	Uncharacterized protein.	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	0.999
fancm	Rad51c	ENSORLP00000018174	ENSORLP00000024828	Uncharacterized protein.	RAD51 paralog C.	0.928
fancm	blm	ENSORLP00000018174	ENSORLP00000027048	Uncharacterized protein.	Uncharacterized protein.	0.998