STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2LYU2_ORYLALeucine rich repeat containing 18a. (286 aa)    
Predicted Functional Partners:
drg2
Developmentally regulated GTP binding protein 2.
      
 0.646
lgr6
Leucine-rich repeat-containing G protein-coupled receptor 6.
  
 
 0.537
H2LYT8_ORYLA
Uncharacterized protein.
    
 
 0.536
fmod
Fibromodulin a.
  
     0.533
H2MBJ4_ORYLA
Uncharacterized protein.
  
     0.529
prelp
Proline/arginine-rich end leucine-rich repeat protein.
  
     0.526
dcn
Decorin; May affect the rate of fibrils formation.
  
     0.525
LOC101159101
Si:dkey-32e6.6.
  
     0.524
chad
Chondroadherin.
  
     0.520
LOC101169042
Leucine rich repeat transmembrane neuronal 4 like 2.
  
     0.519
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.