STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2LYU8_ORYLAUncharacterized protein. (566 aa)    
Predicted Functional Partners:
ENSORLP00000026802
Uncharacterized protein.
 
     
0.865
akap17a
A kinase (PRKA) anchor protein 17A.
      
 0.761
gtpbp6
GTP binding protein 6 (putative).
      
 0.761
cfp
Uncharacterized protein.
 
  
  0.745
anos1
Uncharacterized protein.
      
 0.739
fam136a
Family with sequence similarity 136 member A.
      
 0.738
LOC101167832
Arylsulfatase H.
      
 0.611
sts
Steroid sulfatase (microsomal), isozyme S.
      
 0.611
LOC101169002
Glycogenin 1a.
      
 0.534
LOC101169587
Glycogenin 2.
      
 0.534
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.