STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101161805Zgc:158254. (504 aa)    
Predicted Functional Partners:
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
   
   0.557
pdia3
Protein disulfide-isomerase.
    
 0.426
LOC101165241
Protein disulfide-isomerase.
    
 0.426
p4hb
Protein disulfide-isomerase.
    
 0.426
pdia4
Protein disulfide-isomerase A4; Belongs to the protein disulfide isomerase family.
    
 0.426
txndc11
Thioredoxin domain containing 11.
    
 0.426
secisbp2
SECIS binding protein 2.
    
 0.426
LOC101164281
Protein disulfide-isomerase.
    
 0.426
LOC101160464
Zgc:136472.
    
 0.426
SECISBP2L
SECIS binding protein 2 like.
    
 0.426
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.