STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2LYX4_ORYLASi:dkey-211g8.9. (257 aa)    
Predicted Functional Partners:
Gpr75
G protein-coupled receptor 75.
      
 0.851
LOC101163443
G protein-coupled receptor 142.
     
 0.772
LOC101168042
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
      
 0.763
GPR119
G protein-coupled receptor 119; Belongs to the G-protein coupled receptor 1 family.
     
 0.695
gal
Galanin/GMAP prepropeptide.
      
 0.612
H2MSQ8_ORYLA
ATPase H+ transporting accessory protein 1 like a.
      
 0.603
LOC101159585
ATPase H+ transporting accessory protein 1 like b.
      
 0.603
LOC101166610
Uncharacterized protein; Belongs to the peptidase S9B family.
     
 0.599
LOC101166856
Uncharacterized protein.
     
 0.599
LOC101175205
Fibroblast activation protein, alpha; Belongs to the peptidase S9B family.
     
 0.599
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.