STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101169880Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (420 aa)    
Predicted Functional Partners:
pdpk1
3-phosphoinositide dependent protein kinase 1b.
    
0.820
mapkap1
MAPK associated protein 1.
    
 0.785
H2L4B7_ORYLA
Mechanistic target of rapamycin kinase; Belongs to the PI3/PI4-kinase family.
    
 0.782
Mtor
Serine/threonine-protein kinase TOR.
    
 0.782
rptor
Regulatory associated protein of MTOR, complex 1.
    
 0.773
rps6
Ribosomal protein S6.
    
 0.763
rictor
RPTOR independent companion of MTOR, complex 2 a.
    
 0.742
atp5pd
ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...]
   
 
 0.656
mlst8
MTOR associated protein, LST8 homolog (S. cerevisiae).
 
  
 0.642
atp5f1d
ATP synthase F1 subunit delta.
   
 
 0.617
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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