STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gpr161G protein-coupled receptor 161; Belongs to the G-protein coupled receptor 1 family. (586 aa)    
Predicted Functional Partners:
arrb1
Arrestin, beta 1.
   
 0.946
arrb2
Arrestin, beta 2a.
   
 0.946
EVC2
EvC ciliary complex subunit 2.
      
 0.865
LOC101160964
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 0.860
prkacb
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 0.860
LOC101163742
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.
    
 0.860
LOC101170876
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 0.860
tulp3
Tubby-like protein; Belongs to the TUB family.
    
 0.842
smo
Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 0.822
ift88
Intraflagellar transport 88 homolog.
     
 0.811
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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