STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aff2AF4/FMR2 family, member 2. (1507 aa)    
Predicted Functional Partners:
klf12
Kruppel-like factor 12b.
    
 0.827
Unc79
Uncharacterized protein.
    
 0.786
cdk9
Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily.
    
 0.578
NEUROD2
Neurogenic differentiation factor.
      
 0.567
LOC101171533
Neuronal differentiation 2.
      
 0.567
LOC101160447
RAN binding protein 2.
   
 0.545
tenm1
Teneurin transmembrane protein 1.
   
  
 0.518
LOC101173142
Synaptic vesicle glycoprotein 2.
      
 0.502
LOC105355676
Uncharacterized protein.
  
  0.493
skap1
Src kinase associated phosphoprotein 1.
      
 0.483
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.