STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101170703Ig-like domain-containing protein. (243 aa)    
Predicted Functional Partners:
cd74
CD74 molecule, major histocompatibility complex, class II invariant chain a.
   
  0.927
ENSORLP00000035474
Ig-like domain-containing protein.
    
  0.909
LOC100125525
Uncharacterized protein.
    
  0.906
LOC111948938
Ig-like domain-containing protein.
 
  
  0.755
LOC101156150
Nonclassical MHC class II antigen alpha chain.
   
0.720
LOC101163459
Nonclassical MHC class II antigen alpha chain.
   
0.716
orla-uha
Nonclassical MHC class I molecule, alpha chain; Belongs to the MHC class I family.
    
 0.607
ddb1
Damage-specific DNA binding protein 1.
    
 
 0.606
LOC101163710
Nonclassical MHC class II antigen beta chain.
 
  
 
0.589
LOC101156391
Ig-like domain-containing protein.
 
  
 
0.587
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.