STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scg2Uncharacterized protein. (563 aa)    
Predicted Functional Partners:
GNAS
Uncharacterized protein.
      
 0.593
LOC101166373
GNAS complex locus.
      
 0.593
tac3
Tachykinin 3.
      
 0.573
ENSORLP00000039342
VGF nerve growth factor inducible.
   
  
 0.564
LOC101169782
Insulin-like growth factor binding protein 6b.
      
 0.553
chga
Uncharacterized protein.
   
 
 0.543
cenpi
Centromere protein I.
      
 0.533
rln3a
IlGF domain-containing protein.
      
 0.514
pdyn
Prodynorphin.
   
  
 0.454
trip13
Thyroid hormone receptor interactor 13; Belongs to the AAA ATPase family.
   
  
 0.452
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.