STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rh50Ammonium_transp domain-containing protein; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily. (488 aa)    
Predicted Functional Partners:
nars1
Asparaginyl-tRNA synthetase.
      
 0.589
slc26a5
Solute carrier family 26 member 5.
   
  
 0.579
LOC101164636
Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family.
      
 0.569
LOC101161846
Rh blood group, D antigen; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily.
  
 
0.544
slc26a3
Chloride anion exchanger; Chloride/bicarbonate exchanger. Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
   
  
 0.517
LOC101156309
Sodium/potassium-transporting ATPase subunit alpha.
      
 0.501
ell2
Elongation factor, RNA polymerase II, 2.
      
 0.463
LOC101175513
Carbonic anhydrase XVb; Belongs to the alpha-carbonic anhydrase family.
   
  
 0.456
LOC101169059
Carbonic anhydrase IV a; Belongs to the alpha-carbonic anhydrase family.
   
  
 0.453
ccno
Uncharacterized protein; Belongs to the cyclin family.
      
 0.433
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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