STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101156698Uncharacterized protein. (678 aa)    
Predicted Functional Partners:
guca1b
Uncharacterized protein.
      
 0.502
dapl1
Uncharacterized protein.
      
 0.502
LOC101158587
Uncharacterized protein.
      
 0.502
LOC101156443
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
      
 0.501
LOC111947820
Uncharacterized protein.
      
 0.501
LOC110016650
Speriolin_C domain-containing protein.
      
 0.501
ITPRID2
ITPR interacting domain containing 2.
      
 0.499
LOC101163406
H15 domain-containing protein.
      
 0.499
LOC101164925
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
   
  
 0.491
LOC101166831
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
   
  
 0.491
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.