STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDCL3Phosducin like 3. (254 aa)    
Predicted Functional Partners:
tcp1
T-complex 1.
   
 
 0.923
cct4
T-complex protein 1 subunit delta.
   
 
 0.912
cct6a
Chaperonin containing TCP1, subunit 6A (zeta 1).
   
 
 0.911
cct2
Uncharacterized protein.
   
 
 0.892
cct3
T-complex protein 1 subunit gamma.
   
 
 0.890
cct7
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
   
 
 0.883
cct5
Chaperonin containing TCP1, subunit 5 (epsilon).
   
 
 0.863
cct8
Chaperonin containing TCP1, subunit 8 (theta).
    
 
 0.860
Fam161a
FAM161 centrosomal protein A.
   
 
 0.778
LOC101164426
Uncharacterized protein.
   
 
 0.778
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.