STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101174130Aquaporin 10a; Belongs to the MIP/aquaporin (TC 1.A.8) family. (298 aa)    
Predicted Functional Partners:
ephx2
AB hydrolase-1 domain-containing protein.
   
 
 0.677
gpd2
Glycerol-3-phosphate dehydrogenase 2 (mitochondrial).
  
  
 0.630
exosc8
Exosome component 8.
    
   0.627
wtap
WT1 associated protein.
    
   0.627
ppp1r21
Protein phosphatase 1, regulatory subunit 21.
    
   0.627
aqp8
Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
  
0.625
AQP4
Aquaporin 4; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
  
0.609
aqp1
Aquaporin 1a (Colton blood group), tandem duplicate 1; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
  
0.607
LOC101172481
Aquaporin; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.
      
 0.601
gk
Uncharacterized protein; Belongs to the FGGY kinase family.
 
 
 0.591
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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