STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101161072Tektin 1. (393 aa)    
Predicted Functional Partners:
tekt2
Tektin 2 (testicular).
  
 
0.734
cfap126
Cilia and flagella associated protein 126.
   
 
 0.656
cfap52
Cilia and flagella associated protein 52.
   
 
 0.650
LOC101157797
Cilia and flagella associated protein 45.
   
 
 0.603
efhc1
EF-hand domain (C-terminal) containing 1.
   
 
 0.600
c9h9orf116
Uncharacterized protein.
   
   0.598
spag8
Sperm associated antigen 8.
   
   0.558
efhb
Uncharacterized protein.
   
   0.553
Tex9
Uncharacterized protein.
   
  
 0.552
Wdr90
WD_REPEATS_REGION domain-containing protein.
    
   0.547
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.