STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aifm1Apoptosis inducing factor mitochondrion associated 1. (708 aa)    
Predicted Functional Partners:
LOC101168687
Zgc:153993.
     
 0.936
LOC101168213
BCL2 associated X, apoptosis regulator a.
     
 0.920
LOC101170450
H2A histone family, member Y; Belongs to the histone H2A family.
  
 0.912
LOC101166735
H2A histone family, member Y2.
  
 0.912
H2L4Z2_ORYLA
Histone H2A; Belongs to the histone H2A family.
    
 0.902
H2L4Z9_ORYLA
Histone H2A; Belongs to the histone H2A family.
    
 0.902
ENSORLP00000035124
Histone H2A; Belongs to the histone H2A family.
    
 0.902
ENSORLP00000043593
Histone H2A; Belongs to the histone H2A family.
    
 0.902
LOC101172846
Histone H2A; Belongs to the histone H2A family.
     
  0.900
LOC101170644
H2A histone family, member Va; Belongs to the histone H2A family.
     
  0.900
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.