STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C8AComplement C8 alpha chain. (601 aa)    
Predicted Functional Partners:
c8g
Complement component 8, gamma polypeptide; Belongs to the calycin superfamily. Lipocalin family.
   
 0.992
c9
Complement component 9.
   
0.972
c5
Uncharacterized protein.
   
 0.967
c6
Complement component 6.
   
 
0.876
c7
Complement component 7a.
   
 
0.873
c8b
Complement component 8, beta polypeptide.
  
0.754
LOC101167637
Si:ch1073-280e3.1; Belongs to the peptidase S1 family.
   
 
 0.634
stil
SERPIN domain-containing protein; Belongs to the serpin family.
   
  
 0.620
cpb2
Carboxypeptidase B2 (plasma).
   
  
 0.594
LOC101157838
C1q domain-containing protein.
     
 0.582
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.