Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC101157515 | LOC101160069 | ENSORLP00000016754 | ENSORLP00000011063 | Notum pectinacetylesterase 2. | Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. | 0.723 |
LOC101157515 | LOC101160491 | ENSORLP00000016754 | ENSORLP00000012321 | Notum pectinacetylesterase 2. | Glypican 4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.579 |
LOC101157515 | notum | ENSORLP00000016754 | ENSORLP00000009805 | Notum pectinacetylesterase 2. | Notum, palmitoleoyl-protein carboxylesterase a. | 0.902 |
LOC101160069 | LOC101157515 | ENSORLP00000011063 | ENSORLP00000016754 | Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. | Notum pectinacetylesterase 2. | 0.723 |
LOC101160069 | LOC101160491 | ENSORLP00000011063 | ENSORLP00000012321 | Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. | Glypican 4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.554 |
LOC101160069 | VANGL2 | ENSORLP00000011063 | ENSORLP00000003569 | Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. | Vang-like protein. | 0.600 |
LOC101160069 | notum | ENSORLP00000011063 | ENSORLP00000009805 | Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. | Notum, palmitoleoyl-protein carboxylesterase a. | 0.723 |
LOC101160491 | LOC101157515 | ENSORLP00000012321 | ENSORLP00000016754 | Glypican 4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Notum pectinacetylesterase 2. | 0.579 |
LOC101160491 | LOC101160069 | ENSORLP00000012321 | ENSORLP00000011063 | Glypican 4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. | 0.554 |
LOC101160491 | LOC101169622 | ENSORLP00000012321 | ENSORLP00000043179 | Glypican 4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.666 |
LOC101160491 | LOC101173693 | ENSORLP00000012321 | ENSORLP00000002792 | Glypican 4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Heparan sulfate 2-O-sulfotransferase 1b. | 0.522 |
LOC101160491 | SDC3 | ENSORLP00000012321 | ENSORLP00000030158 | Glypican 4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.524 |
LOC101160491 | VANGL2 | ENSORLP00000012321 | ENSORLP00000003569 | Glypican 4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Vang-like protein. | 0.558 |
LOC101160491 | b4galt7 | ENSORLP00000012321 | ENSORLP00000014495 | Glypican 4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Uncharacterized protein. | 0.546 |
LOC101160491 | ddx46 | ENSORLP00000012321 | ENSORLP00000041244 | Glypican 4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | DEAD (Asp-Glu-Ala-Asp) box polypeptide 46. | 0.573 |
LOC101160491 | ext2 | ENSORLP00000012321 | ENSORLP00000029200 | Glypican 4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Exostosin glycosyltransferase 2; Belongs to the glycosyltransferase 47 family. | 0.599 |
LOC101160491 | notum | ENSORLP00000012321 | ENSORLP00000009805 | Glypican 4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Notum, palmitoleoyl-protein carboxylesterase a. | 0.579 |
LOC101169622 | LOC101160491 | ENSORLP00000043179 | ENSORLP00000012321 | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | Glypican 4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.666 |
LOC101169622 | LOC101173693 | ENSORLP00000043179 | ENSORLP00000002792 | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | Heparan sulfate 2-O-sulfotransferase 1b. | 0.627 |
LOC101169622 | SDC3 | ENSORLP00000043179 | ENSORLP00000030158 | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.673 |
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